SymbC1.scaffold4007.3 (4007.3)

Aliases : 4007.3

Description : SUF system FeS cluster assembly, SufBD [Interproscan].

Gene families : OG_01_0001987 (OrthoFinder) Phylogenetic Tree(s): OG0001987_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold4007.3
Cluster	HCCA: Cluster_75

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cre15.g643600	30783744, SUF2	Coenzyme metabolism.iron-sulfur cluster assembly...	0.02	OrthoFinder
lcl\|LHPG02000001.1_cds_PRW61534.1_296	PRW61534	ATP-binding cassette superfamily	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016226	iron-sulfur cluster assembly	IEA	Interproscan
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0031163	metallo-sulfur cluster assembly	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000159	protein phosphatase type 2A complex	IEP	Enrichment
MF	GO:0004827	proline-tRNA ligase activity	IEP	Enrichment
CC	GO:0005963	magnesium-dependent protein serine/threonine phosphatase complex	IEP	Enrichment
BP	GO:0005984	disaccharide metabolic process	IEP	Enrichment
BP	GO:0005991	trehalose metabolic process	IEP	Enrichment
BP	GO:0005992	trehalose biosynthetic process	IEP	Enrichment
BP	GO:0006433	prolyl-tRNA aminoacylation	IEP	Enrichment
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Enrichment
BP	GO:0006629	lipid metabolic process	IEP	Enrichment
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Enrichment
BP	GO:0009311	oligosaccharide metabolic process	IEP	Enrichment
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Enrichment
MF	GO:0019888	protein phosphatase regulator activity	IEP	Enrichment
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Enrichment
MF	GO:0030170	pyridoxal phosphate binding	IEP	Enrichment
CC	GO:0033179	proton-transporting V-type ATPase, V0 domain	IEP	Enrichment
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Enrichment
BP	GO:0046351	disaccharide biosynthetic process	IEP	Enrichment
MF	GO:0070279	vitamin B6 binding	IEP	Enrichment
CC	GO:1903293	phosphatase complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000825	SUF_FeS_clus_asmbl_SufBD	235	360

External Links

No external refs found!