SymbC1.scaffold4.59 (4.59)


Aliases : 4.59

Description : Band 7 domain; UspA; NfeD-like, C-terminal domain [Interproscan].


Gene families : OG_01_0023958 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4.59
Cluster HCCA: Cluster_6


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Enrichment
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Enrichment
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0006568 tryptophan metabolic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006586 indolalkylamine metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0015232 heme transmembrane transporter activity IEP Enrichment
BP GO:0015886 heme transport IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0017003 protein-heme linkage IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
BP GO:0017006 protein-tetrapyrrole linkage IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042430 indole-containing compound metabolic process IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901678 iron coordination entity transport IEP Enrichment
InterPro domains Description Start Stop
IPR002810 NfeD-like_C 505 587
IPR006016 UspA 1284 1424
IPR006016 UspA 1131 1273
IPR006016 UspA 2149 2289
IPR001107 Band_7 614 782
No external refs found!