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  5. SymbC1.scaffold4.569

SymbC1.scaffold4.569 (4.569)


Aliases : 4.569

Description : Enoyl-CoA hydratase/isomerase; DNA-binding HTH domain, TetR-type [Interproscan].


Gene families : OG_01_0000228 (OrthoFinder) Phylogenetic Tree(s): OG0000228_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4.569
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
PTI_29G01260.1 No alias Enoyl-CoA hydratase/isomerase [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold15.178 15.178 Biotin/lipoyl attachment; Enoyl-CoA hydratase/isomerase;... 0.03 OrthoFinder
SymbC1.scaffold2.2165 2.2165 Enoyl-CoA hydratase/isomerase [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold4.1631 4.1631 Glyoxalase/fosfomycin resistance/dioxygenase domain;... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
InterPro domains Description Start Stop
IPR001753 Enoyl-CoA_hydra/iso 196 446
IPR001647 HTH_TetR 12 57
No external refs found!