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  5. SymbC1.scaffold4.452

SymbC1.scaffold4.452 (4.452)


Aliases : 4.452

Description : AMP-binding enzyme, C-terminal domain; AMP-dependent synthetase/ligase; Phytanoyl-CoA dioxygenase [Interproscan].


Gene families : OG_01_0000081 (OrthoFinder) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4.452
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold2.2009 2.2009 2-oxoacid dehydrogenase acyltransferase, catalytic... 0.02 OrthoFinder
SymbC1.scaffold23619.1 23619.1 AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 1050 1125
IPR000873 AMP-dep_Synth/Lig 643 1041
IPR008775 Phytyl_CoA_dOase 136 330
No external refs found!