SymbC1.scaffold4.1799 (4.1799)


Aliases : 4.1799

Description : Acriflavin resistance protein; Multi antimicrobial extrusion protein; Transcription regulator HTH, GntR; HlyD family secretion protein [Interproscan].


Gene families : OG_01_0005050 (OrthoFinder) Phylogenetic Tree(s): OG0005050_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4.1799
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold19.22 19.22 Acriflavin resistance protein; Outer membrane efflux... 0.03 OrthoFinder
SymbC1.scaffold33175.1 33175.1 Transcription regulator YbiH, C-terminal [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0004040 amidase activity IEP Enrichment
MF GO:0005436 sodium:phosphate symporter activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0015081 sodium ion transmembrane transporter activity IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
MF GO:0015294 solute:cation symporter activity IEP Enrichment
MF GO:0015370 solute:sodium symporter activity IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0030674 protein-macromolecule adaptor activity IEP Enrichment
MF GO:0032182 ubiquitin-like protein binding IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0043130 ubiquitin binding IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
BP GO:0044341 sodium-dependent phosphate transport IEP Enrichment
MF GO:0050043 lactate racemase activity IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000524 Tscrpt_reg_HTH_GntR 5 62
IPR002528 MATE_fam 1923 2073
IPR002528 MATE_fam 1699 1859
IPR001036 Acrflvin-R 625 1653
No external refs found!