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  5. SymbC1.scaffold4.1643

SymbC1.scaffold4.1643 (4.1643)


Aliases : 4.1643

Description : Flagellin, D0/D1 domain; FlgD Tudor-like domain; Flagellar hook capping protein; Flagellar P-ring protein; FlgD Ig-like domain; Flagellar protein FlgJ, N-terminal; Flagellar L-ring protein; Flagellar basal body rod protein, N-terminal; Flagellar hook protein FlgE; Flagellar basal-body/hook protein, C-terminal domain [Interproscan].


Gene families : OG_01_0003914 (OrthoFinder) Phylogenetic Tree(s): OG0003914_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4.1643
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1.1785 1.1785 Flagellin, D0/D1 domain; Flagella basal body P-ring... 0.03 OrthoFinder
SymbC1.scaffold1.197 1.197 DAHP synthetase I/KDSA; Diacylglycerol kinase, catalytic... 0.03 OrthoFinder
SymbC1.scaffold2.105 2.105 Flagellin, D0/D1 domain; Oxidoreductase, N-terminal;... 0.04 OrthoFinder
SymbC1.scaffold9.173 9.173 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEA Interproscan
MF GO:0005198 structural molecule activity IEA Interproscan
CC GO:0009427 bacterial-type flagellum basal body, distal rod, L ring IEA Interproscan
CC GO:0009428 bacterial-type flagellum basal body, distal rod, P ring IEA Interproscan
CC GO:0030288 outer membrane-bounded periplasmic space IEA Interproscan
BP GO:0071973 bacterial-type flagellum-dependent cell motility IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
BP GO:0008360 regulation of cell shape IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Enrichment
BP GO:0022604 regulation of cell morphogenesis IEP Enrichment
BP GO:0050793 regulation of developmental process IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
InterPro domains Description Start Stop
IPR025965 FlgD_Ig 110 178
IPR025963 FLgD_Tudor 87 222
IPR010930 Flg_bb/hook_C_dom 580 624
IPR010930 Flg_bb/hook_C_dom 1027 1097
IPR010930 Flg_bb/hook_C_dom 776 845
IPR011491 Falgellar_hook_FlgE 406 516
IPR019301 Flagellar_prot_FlgJ_N 1702 1747
IPR001782 Flag_FlgI 1347 1686
IPR001029 Flagellin_D0/D1 2722 2804
IPR001029 Flagellin_D0/D1 2410 2546
IPR000527 Flag_Lring 1156 1318
IPR001444 Flag_bb_rod_N 853 879
IPR001444 Flag_bb_rod_N 1806 1830
IPR001444 Flag_bb_rod_N 233 263
IPR005648 FlgD 15 79
No external refs found!