SymbC1.scaffold4.1099 (4.1099)

Aliases : 4.1099

Description : Methyl-accepting chemotaxis protein (MCP) signalling domain; Histidine kinase/HSP90-like ATPase; Signal transduction response regulator, receiver domain; CheW-like domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain [Interproscan].

Gene families : OG_01_0024319 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: SymbC1.scaffold4.1099
Cluster HCCA: Cluster_83

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
BP GO:0006935 chemotaxis IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR003594 HATPase_C 2330 2466
IPR004089 MCPsignal_dom 462 645
IPR001789 Sig_transdc_resp-reg_receiver 4 115
IPR001789 Sig_transdc_resp-reg_receiver 2625 2736
IPR002545 CheW-lke_dom 2472 2603
IPR002545 CheW-lke_dom 141 266
IPR008207 Sig_transdc_His_kin_Hpt_dom 1970 2058
IPR008207 Sig_transdc_His_kin_Hpt_dom 1405 1487
IPR008207 Sig_transdc_His_kin_Hpt_dom 1608 1694
No external refs found!