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  5. SymbC1.scaffold4.1022

SymbC1.scaffold4.1022 (4.1022)


Aliases : 4.1022

Description : Glucose/Sorbosone dehydrogenase [Interproscan].


Gene families : OG_01_0001851 (OrthoFinder) Phylogenetic Tree(s): OG0001851_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4.1022
Cluster HCCA: Cluster_280

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1.1029 1.1029 STAS domain; Glucose/Sorbosone dehydrogenase [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold1.1535 1.1535 Transglutaminase-like; Glucose/Sorbosone dehydrogenase... 0.08 OrthoFinder
SymbC1.scaffold27239.1 27239.1 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold4.180 4.180 Glycosyl transferases group 1; Glucose/Sorbosone... 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8500079.1_9032 KAA8500079 Putative MscS family protein YkuT 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0004150 dihydroneopterin aldolase activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
InterPro domains Description Start Stop
IPR012938 Glc/Sorbosone_DH 32 360
No external refs found!