SymbC1.scaffold4.1019 (4.1019)

Aliases : 4.1019

Description : Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Aminotransferase, class I/classII [Interproscan].

Gene families : OG_01_0000692 (OrthoFinder) Phylogenetic Tree(s): OG0000692_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold4.1019
Cluster	HCCA: Cluster_185

Target	Alias	Description	ECC score	Gene Family Method	Actions
SymbC1.scaffold2.1061	2.1061	HEAT repeats; Aminotransferase, class I/classII [Interproscan].	0.03	OrthoFinder
SymbC1.scaffold20.94	20.94	Transcription regulator LuxR, C-terminal; Cyclic...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	IEA	Interproscan
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	IEA	Interproscan
MF	GO:0030976	thiamine pyrophosphate binding	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0070279	vitamin B6 binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
MF	GO:1901681	sulfur compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003725	double-stranded RNA binding	IEP	Enrichment
MF	GO:0004127	cytidylate kinase activity	IEP	Enrichment
BP	GO:0006541	glutamine metabolic process	IEP	Enrichment
BP	GO:0006542	glutamine biosynthetic process	IEP	Enrichment
MF	GO:0008270	zinc ion binding	IEP	Enrichment
MF	GO:0015002	obsolete heme-copper terminal oxidase activity	IEP	Enrichment
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	Enrichment
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Enrichment
CC	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	IEP	Enrichment
MF	GO:0046914	transition metal ion binding	IEP	Enrichment
MF	GO:0050145	nucleoside monophosphate kinase activity	IEP	Enrichment
MF	GO:0070402	NADPH binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR012001	Thiamin_PyroP_enz_TPP-bd_dom	6	173
IPR004839	Aminotransferase_I/II	569	914
IPR011766	TPP_enzyme-bd_C	391	527
IPR012000	Thiamin_PyroP_enz_cen_dom	194	326

External Links

No external refs found!

SymbC1.scaffold4.1019 (4.1019)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation