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Aliases : 3940.4
Description : RNA recognition motif domain [Interproscan].
Gene families : OG_01_0001310 (OrthoFinder) Phylogenetic Tree(s): OG0001310_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: SymbC1.scaffold3940.4 | |
| Cluster | HCCA: Cluster_167 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| lcl|BLLF01002499.1_cds_GFH24309.1_18786 | HaLaN_22077, GFH24309 | RNA recognition motif domain [Interproscan]. | 0.01 | OrthoFinder | |
| lcl|BLLF01004100.1_cds_GFH28915.1_23392 | HaLaN_27483, GFH28915 | RNA recognition motif domain [Interproscan]. | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000139 | Golgi membrane | IEP | Enrichment |
| MF | GO:0004417 | hydroxyethylthiazole kinase activity | IEP | Enrichment |
| MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Enrichment |
| MF | GO:0004843 | thiol-dependent deubiquitinase | IEP | Enrichment |
| MF | GO:0005338 | nucleotide-sugar transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0005576 | extracellular region | IEP | Enrichment |
| CC | GO:0005887 | integral component of plasma membrane | IEP | Enrichment |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | Enrichment |
| BP | GO:0006397 | mRNA processing | IEP | Enrichment |
| BP | GO:0006772 | thiamine metabolic process | IEP | Enrichment |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Enrichment |
| MF | GO:0008242 | omega peptidase activity | IEP | Enrichment |
| MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | Enrichment |
| BP | GO:0009228 | thiamine biosynthetic process | IEP | Enrichment |
| BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | Enrichment |
| MF | GO:0015099 | nickel cation transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0015675 | nickel cation transport | IEP | Enrichment |
| BP | GO:0015780 | nucleotide-sugar transmembrane transport | IEP | Enrichment |
| BP | GO:0015977 | carbon fixation | IEP | Enrichment |
| MF | GO:0016160 | amylase activity | IEP | Enrichment |
| MF | GO:0016161 | beta-amylase activity | IEP | Enrichment |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Enrichment |
| MF | GO:0030247 | polysaccharide binding | IEP | Enrichment |
| MF | GO:0030248 | cellulose binding | IEP | Enrichment |
| CC | GO:0030286 | dynein complex | IEP | Enrichment |
| CC | GO:0031226 | intrinsic component of plasma membrane | IEP | Enrichment |
| BP | GO:0035444 | nickel cation transmembrane transport | IEP | Enrichment |
| BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | Enrichment |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0090481 | pyrimidine nucleotide-sugar transmembrane transport | IEP | Enrichment |
| CC | GO:0098588 | bounding membrane of organelle | IEP | Enrichment |
| MF | GO:0101005 | deubiquitinase activity | IEP | Enrichment |
| No external refs found! |