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  5. SymbC1.scaffold3928.2

SymbC1.scaffold3928.2 (3928.2)


Aliases : 3928.2

Description : ABC transporter-like; Chromo domain [Interproscan].


Gene families : OG_01_0000392 (OrthoFinder) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold3928.2
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Dusal.0160s00022.1 33188332 ABC transporter-like; Four helical bundle domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold6101.1 6101.1 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_89947 89947 ABC transporter-like [Interproscan]. 0.01 OrthoFinder
XM_003057747.1 MicpuC2_16010, 16010 ABC transporter-like [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 353 505
IPR003439 ABC_transporter-like_ATP-bd 624 877
IPR023780 Chromo_domain 757 798
No external refs found!