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Aliases : 3926.5
Description : LSM domain, eukaryotic/archaea-type [Interproscan].
Gene families : OG_01_0000904 (OrthoFinder) Phylogenetic Tree(s): OG0000904_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: SymbC1.scaffold3926.5 | |
| Cluster | HCCA: Cluster_46 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre10.g455300 | 30789915 | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.01 | OrthoFinder | |
| Cz06g34330.t1 | No alias | LSM domain, eukaryotic/archaea-type [Interproscan]. | 0.01 | OrthoFinder | |
| XM_002501798.1 | MICPUN_80773, 80773 | LSM domain, eukaryotic/archaea-type [Interproscan]. | 0.05 | OrthoFinder | |
| XM_002507873.1 | MICPUN_84175, 84175 | LSM domain, eukaryotic/archaea-type [Interproscan]. | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Enrichment |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Enrichment |
| MF | GO:0004180 | carboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Enrichment |
| CC | GO:0005743 | mitochondrial inner membrane | IEP | Enrichment |
| CC | GO:0005750 | mitochondrial respiratory chain complex III | IEP | Enrichment |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Enrichment |
| BP | GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c | IEP | Enrichment |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Enrichment |
| MF | GO:0008238 | exopeptidase activity | IEP | Enrichment |
| BP | GO:0009060 | aerobic respiration | IEP | Enrichment |
| BP | GO:0010035 | response to inorganic substance | IEP | Enrichment |
| BP | GO:0010038 | response to metal ion | IEP | Enrichment |
| BP | GO:0015980 | energy derivation by oxidation of organic compounds | IEP | Enrichment |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Enrichment |
| MF | GO:0017171 | serine hydrolase activity | IEP | Enrichment |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Enrichment |
| BP | GO:0018208 | peptidyl-proline modification | IEP | Enrichment |
| BP | GO:0019646 | aerobic electron transport chain | IEP | Enrichment |
| CC | GO:0019866 | organelle inner membrane | IEP | Enrichment |
| BP | GO:0022900 | electron transport chain | IEP | Enrichment |
| BP | GO:0022904 | respiratory electron transport chain | IEP | Enrichment |
| CC | GO:0031090 | organelle membrane | IEP | Enrichment |
| CC | GO:0031966 | mitochondrial membrane | IEP | Enrichment |
| BP | GO:0042221 | response to chemical | IEP | Enrichment |
| CC | GO:0045275 | respiratory chain complex III | IEP | Enrichment |
| BP | GO:0045333 | cellular respiration | IEP | Enrichment |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | Enrichment |
| CC | GO:0070069 | cytochrome complex | IEP | Enrichment |
| CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
| CC | GO:0098798 | mitochondrial protein-containing complex | IEP | Enrichment |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Enrichment |
| CC | GO:0098803 | respiratory chain complex | IEP | Enrichment |
| CC | GO:1902494 | catalytic complex | IEP | Enrichment |
| CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001163 | LSM_dom_euk/arc | 7 | 71 |
| No external refs found! |