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  5. SymbC1.scaffold3903.3

SymbC1.scaffold3903.3 (3903.3)


Aliases : 3903.3

Description : Chlorophyll A-B binding protein [Interproscan].


Gene families : OG_01_0000076 (OrthoFinder) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold3903.3
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
EOD07752 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
EOD08157 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD18950 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD24660 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD26056 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD33861 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
Sro101_g051590.1 Contig348.g4712 Fucoxanthin-chlorophyll a-c binding protein 0.01 OrthoFinder
Sro1151_g246800.1 Contig4710.g35031 Chloroplastic 0.01 OrthoFinder
Sro234_g094380.1 Contig3223.g25485 Fucoxanthin-chlorophyll a-c binding protein 0.01 OrthoFinder
Sro263_g102180.1 Contig612.g7540 Fucoxanthin-chlorophyll a-c binding protein A, chloroplastic 0.01 OrthoFinder
Sro453_g146050.1 Contig1693.g15162 B binding protein CP29 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498066.1_7019 KAA8498066 Chlorophyll a-b binding protein of LHCII type III, chloroplastic 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499797.1_8750 KAA8499797 Chlorophyll a-b binding protein 1B-21, chloroplastic 0.01 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8493980.1_3844 KAA8493980 Chlorophyll a-b binding protein 1B-21, chloroplastic 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 98 242
No external refs found!