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  5. SymbC1.scaffold3893.1

SymbC1.scaffold3893.1 (3893.1)


Aliases : 3893.1

Description : Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase family 3 C-terminal domain [Interproscan].


Gene families : OG_01_0000878 (OrthoFinder) Phylogenetic Tree(s): OG0000878_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3893.1
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Sro756_g197720.1 Contig3619.g27988 Lysosomal beta glucosidase 0.02 OrthoFinder
Sro816_g206720.1 Contig51.g377 Xylosidase/alpha-L-arabinofuranosidase 1 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004357 glutamate-cysteine ligase activity IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006749 glutathione metabolic process IEP Enrichment
BP GO:0006750 glutathione biosynthetic process IEP Enrichment
MF GO:0016805 dipeptidase activity IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0030248 cellulose binding IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001764 Glyco_hydro_3_N 16 190
IPR002772 Glyco_hydro_3_C 286 416
No external refs found!