SymbC1.scaffold3877.3 (3877.3)


Aliases : 3877.3

Description : Hypothetical protein


Gene families : OG_01_0000787 (OrthoFinder) Phylogenetic Tree(s): OG0000787_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3877.3
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold12491.2 12491.2 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold13812.1 13812.1 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold15063.1 15063.1 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold16581.3 16581.3 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold3275.2 3275.2 Hypothetical protein 0.06 OrthoFinder
SymbC1.scaffold5705.3 5705.3 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold6135.1 6135.1 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold6551.4 6551.4 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold663.7 663.7 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold7085.3 7085.3 Hypothetical protein 0.01 OrthoFinder
SymbC1.scaffold9463.3 9463.3 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
MF GO:0005539 glycosaminoglycan binding IEP Enrichment
BP GO:0006164 purine nucleotide biosynthetic process IEP Enrichment
BP GO:0006177 GMP biosynthetic process IEP Enrichment
BP GO:0006188 IMP biosynthetic process IEP Enrichment
BP GO:0006189 'de novo' IMP biosynthetic process IEP Enrichment
BP GO:0006282 regulation of DNA repair IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0008614 pyridoxine metabolic process IEP Enrichment
BP GO:0008615 pyridoxine biosynthetic process IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0009260 ribonucleotide biosynthetic process IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
CC GO:0015627 type II protein secretion system complex IEP Enrichment
BP GO:0015628 protein secretion by the type II secretion system IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
MF GO:0033856 pyridoxine 5'-phosphate synthase activity IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
BP GO:0042816 vitamin B6 metabolic process IEP Enrichment
BP GO:0042819 vitamin B6 biosynthetic process IEP Enrichment
MF GO:0042834 peptidoglycan binding IEP Enrichment
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0046037 GMP metabolic process IEP Enrichment
BP GO:0046040 IMP metabolic process IEP Enrichment
BP GO:0046390 ribose phosphate biosynthetic process IEP Enrichment
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051052 regulation of DNA metabolic process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051253 negative regulation of RNA metabolic process IEP Enrichment
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
BP GO:0072522 purine-containing compound biosynthetic process IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:0080134 regulation of response to stress IEP Enrichment
BP GO:0080135 regulation of cellular response to stress IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:0098776 protein transport across the cell outer membrane IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001020 regulation of response to DNA damage stimulus IEP Enrichment

No InterPro domains available for this sequence

No external refs found!