SymbC1.scaffold3870.5 (3870.5)


Aliases : 3870.5

Description : Hypothetical protein


Gene families : OG_01_0000460 (OrthoFinder) Phylogenetic Tree(s): OG0000460_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3870.5
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1333.3 1333.3 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold15904.1 15904.1 Hypothetical protein 0.07 OrthoFinder
SymbC1.scaffold165.11 165.11 Reverse transcriptase, RNA-dependent DNA polymerase... 0.01 OrthoFinder
SymbC1.scaffold1681.1 1681.1 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold2241.2 2241.2 Reverse transcriptase, RNA-dependent DNA polymerase... 0.09 OrthoFinder
SymbC1.scaffold230.5 230.5 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold3394.1 3394.1 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold3633.3 3633.3 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold413.10 413.10 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold473.5 473.5 Hypothetical protein 0.07 OrthoFinder
SymbC1.scaffold5347.3 5347.3 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold8060.3 8060.3 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006783 heme biosynthetic process IEP Enrichment
BP GO:0006784 heme A biosynthetic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0045017 glycerolipid biosynthetic process IEP Enrichment
BP GO:0046160 heme a metabolic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment

No InterPro domains available for this sequence

No external refs found!