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  5. SymbC1.scaffold384.2

SymbC1.scaffold384.2 (384.2)


Aliases : 384.2

Description : Aldose 1-/Glucose-6-phosphate 1-epimerase; KDPG/KHG aldolase; WD40 repeat [Interproscan].


Gene families : OG_01_0000555 (OrthoFinder) Phylogenetic Tree(s): OG0000555_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold384.2
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Vocar.0005s0043.1 32883603 Aldose 1-/Glucose-6-phosphate 1-epimerase [Interproscan]. 0.03 OrthoFinder
Vocar.0005s0044.1 32883805 Aldose 1-/Glucose-6-phosphate 1-epimerase [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
MF GO:0016853 isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR000887 Aldlse_KDPG_KHG 314 422
IPR001680 WD40_repeat 651 679
IPR001680 WD40_repeat 606 640
IPR001680 WD40_repeat 505 543
IPR001680 WD40_repeat 463 500
IPR008183 Aldose_1/G6P_1-epimerase 12 213
No external refs found!