Aliases : 3818.4
Description : Ribosomal protein S10 domain [Interproscan].
Gene families : OG_01_0003147 (OrthoFinder) Phylogenetic Tree(s): OG0003147_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: SymbC1.scaffold3818.4 | |
Cluster | HCCA: Cluster_21 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000842.28 | tig00000842_g4847.t1 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder | |
Cre16.g660150 | 30777532 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder | |
Cz02g17070.t1 | No alias | Ribosomal protein S10 domain [Interproscan]. | 0.03 | OrthoFinder | |
Dusal.0043s00003.1 | 33199620 | Ribosomal protein S10 domain [Interproscan]. | 0.02 | OrthoFinder | |
OT_03G01040.1 | No alias | Ribosomal protein S10 domain [Interproscan]. | 0.01 | OrthoFinder | |
PTI_31G00020.1 | No alias | Ribosomal protein S10 domain [Interproscan]. | 0.03 | OrthoFinder | |
Sro143_g066550.1 | Contig3754.g28761 | 40S ribosomal protein S20 | 0.03 | OrthoFinder | |
TP04G01100.1 | No alias | Ribosomal protein S10 domain [Interproscan]. | 0.02 | OrthoFinder | |
Vocar.0004s0092.1 | 32889737 | Ribosomal protein S10 domain [Interproscan]. | 0.02 | OrthoFinder | |
XM_002501663.1 | MICPUN_57744, 57744 | Ribosomal protein S10 domain [Interproscan]. | 0.03 | OrthoFinder | |
XM_003062597.1 | MicpuC2_35904, 35904 | Ribosomal protein S10 domain [Interproscan]. | 0.03 | OrthoFinder | |
lcl|LHPG02000010.1_cds_PRW51058.1_1171 | PRW51058 | Ribosomal S1 | 0.02 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8499872.1_8825 | KAA8499872 | 40S ribosomal protein S20 | 0.01 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
MF | GO:0004797 | thymidine kinase activity | IEP | Enrichment |
MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
CC | GO:0005840 | ribosome | IEP | Enrichment |
BP | GO:0006412 | translation | IEP | Enrichment |
BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
MF | GO:0019136 | deoxynucleoside kinase activity | IEP | Enrichment |
MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Enrichment |
MF | GO:0019206 | nucleoside kinase activity | IEP | Enrichment |
BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
CC | GO:0043226 | organelle | IEP | Enrichment |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR027486 | Ribosomal_S10_dom | 20 | 71 |
No external refs found! |