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  5. SymbC1.scaffold36907.1

SymbC1.scaffold36907.1 (36907.1)


Aliases : 36907.1

Description : Domain of unknown function DUF1549 [Interproscan].


Gene families : OG_01_0001322 (OrthoFinder) Phylogenetic Tree(s): OG0001322_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold36907.1
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1.1031 1.1031 Domain of unknown function DUF1549; Domain of unknown... 0.02 OrthoFinder
SymbC1.scaffold14578.1 14578.1 Domain of unknown function DUF1549; Domain of unknown... 0.04 OrthoFinder
SymbC1.scaffold2.1742 2.1742 Domain of unknown function DUF1549; Domain of unknown... 0.04 OrthoFinder
SymbC1.scaffold2.2083 2.2083 Cytochrome C, Planctomycete-type; WD40 repeat;... 0.04 OrthoFinder
SymbC1.scaffold2.651 2.651 Domain of unknown function DUF1553; Solute carrier... 0.04 OrthoFinder
SymbC1.scaffold25038.1 25038.1 Domain of unknown function DUF1549 [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold27051.1 27051.1 Domain of unknown function DUF1549 [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold33693.1 33693.1 Domain of unknown function DUF1549 [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0001539 cilium or flagellum-dependent cell motility IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004529 exodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
MF GO:0008855 exodeoxyribonuclease VII activity IEP Enrichment
CC GO:0009428 bacterial-type flagellum basal body, distal rod, P ring IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0040011 locomotion IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0048870 cell motility IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071973 bacterial-type flagellum-dependent cell motility IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0097588 archaeal or bacterial-type flagellum-dependent cell motility IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR011444 DUF1549 173 292
No external refs found!