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  5. SymbC1.scaffold3680.1

SymbC1.scaffold3680.1 (3680.1)


Aliases : 3680.1

Description : Transcription factor, GTP-binding domain; Translation elongation factor EFTu/EF1A, C-terminal [Interproscan].


Gene families : OG_01_0000147 (OrthoFinder) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3680.1
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
PTI_13G03040.1 No alias Translation elongation factor EFTu-like, domain 2;... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 7 121
IPR004160 Transl_elong_EFTu/EF1A_C 166 270
No external refs found!