SymbC1.scaffold3664.6 (3664.6)

Aliases : 3664.6

Description : ABC transporter-like; Serine aminopeptidase, S33; ABC-transporter extension domain [Interproscan].

Gene families : OG_01_0000132 (OrthoFinder) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold3664.6
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
Cre11.g478128	30775784	ABC transporter F family member 3 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cz05g08050.t1	No alias	ABC-transporter extension domain; ABC transporter-like...	0.02	OrthoFinder
Dusal.0100s00016.1	33202465	ABC transporter-like [Interproscan].	0.02	OrthoFinder
OT_15G02610.1	No alias	ABC-transporter extension domain; ABC transporter-like...	0.01	OrthoFinder
Sro1254_g256400.2	No alias	ABC transporter-like [Interproscan].	0.02	OrthoFinder
Vocar.0007s0396.1	32888020	ABC-transporter extension domain; ABC transporter-like...	0.01	OrthoFinder
XM_003057335.1	MicpuC2_70921, 70921	Zinc finger/ABC transporter fusion protein	0.01	OrthoFinder
XM_003060298.1	MicpuC2_60050, 60050	ABC transporter	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	Enrichment
MF	GO:0005525	GTP binding	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
MF	GO:0019001	guanyl nucleotide binding	IEP	Enrichment
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	771	910
IPR022742	Hydrolase_4	77	196
IPR003439	ABC_transporter-like_ATP-bd	451	616
IPR032781	ABC_tran_Xtn	657	728

External Links

No external refs found!