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  5. SymbC1.scaffold3580.6

SymbC1.scaffold3580.6 (3580.6)


Aliases : 3580.6

Description : Ribosomal protein S17e [Interproscan].


Gene families : OG_01_0002798 (OrthoFinder) Phylogenetic Tree(s): OG0002798_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3580.6
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cre12.g498250 30793608, RPS17 Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder
Cz02g24100.t1 No alias Ribosomal protein S17e [Interproscan]. 0.01 OrthoFinder
OT_04G05050.1 No alias Ribosomal protein S17e [Interproscan]. 0.02 OrthoFinder
PTI_05G01130.1 No alias Ribosomal protein S17e [Interproscan]. 0.03 OrthoFinder
Sro13_g009690.1 Contig337.g4510 40S ribosomal protein S17 0.03 OrthoFinder
TP16G00420.1 No alias Ribosomal protein S17e [Interproscan]. 0.02 OrthoFinder
Vocar.0006s0265.1 32893973 Ribosomal protein S17e [Interproscan]. 0.03 OrthoFinder
XM_002504075.1 MICPUN_76945, 76945 Ribosomal protein S17e [Interproscan]. 0.03 OrthoFinder
XM_003059599.1 MicpuC2_34073, 34073 Ribosomal protein S17e [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01003084.1_cds_GFH26294.1_20771 HaLaN_24421, GFH26294 Ribosomal protein S17e [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56597.1_9573 PRW56597 40S ribosomal S17 isoform A 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001210 Ribosomal_S17e 83 130
IPR001210 Ribosomal_S17e 1 66
No external refs found!