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  5. SymbC1.scaffold356.4

SymbC1.scaffold356.4 (356.4)


Aliases : 356.4

Description : Ribosomal protein L29/L35 [Interproscan].


Gene families : OG_01_0003855 (OrthoFinder) Phylogenetic Tree(s): OG0003855_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold356.4
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.79 tig00000241_g20941.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder
Cre14.g617900 30776584, RPL35 Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 OrthoFinder
Cz12g12300.t1 No alias Ribosomal protein L29/L35 [Interproscan]. 0.1 OrthoFinder
EOD14796 No alias Ribosomal protein L29/L35 [Interproscan]. 0.02 OrthoFinder
OT_05G01490.1 No alias Ribosomal protein L29/L35 [Interproscan]. 0.04 OrthoFinder
PTI_06G01310.1 No alias Ribosomal protein L29/L35 [Interproscan]. 0.06 OrthoFinder
Sro1394_g268940.1 Contig598.g7460 60S ribosomal protein L35 0.09 OrthoFinder
TP12G02050.1 No alias Ribosomal protein L29/L35 [Interproscan]. 0.07 OrthoFinder
Vocar.0001s1458.1 32885943 Ribosomal protein L29/L35 [Interproscan]. 0.04 OrthoFinder
XM_002507650.1 MICPUN_107597, 107597 Ribosomal protein L29/L35 [Interproscan]. 0.06 OrthoFinder
lcl|LHPG02000021.1_cds_PRW20803.1_5002 PRW20803 60S ribosomal L35-like 0.04 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492667.1_9360 KAA8492667 60S ribosomal protein L35 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 7 63
No external refs found!