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  5. SymbC1.scaffold356.19

SymbC1.scaffold356.19 (356.19)


Aliases : 356.19

Description : Ribosomal protein L18e/L15P [Interproscan].


Gene families : OG_01_0002680 (OrthoFinder) Phylogenetic Tree(s): OG0002680_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold356.19
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cre02.g115200 30785578, RPL27a Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 OrthoFinder
Cz04g17060.t1 No alias Ribosomal protein L18e/L15P [Interproscan]. 0.05 OrthoFinder
Dusal.0238s00023.1 33193670 Ribosomal protein L18e/L15P [Interproscan]. 0.05 OrthoFinder
EOD32643 No alias Ribosomal protein L18e/L15P [Interproscan]. 0.06 OrthoFinder
OT_15G01270.1 No alias Ribosomal protein L18e/L15P [Interproscan]. 0.04 OrthoFinder
PTI_01G10340.1 No alias Ribosomal protein L18e/L15P [Interproscan]. 0.05 OrthoFinder
Sro245_g097470.1 Contig3087.g24618 60S ribosomal protein L27a 0.07 OrthoFinder
TP02G09610.1 No alias Ribosomal protein L18e/L15P [Interproscan]. 0.04 OrthoFinder
Transcript_contig_69769 69769 Hypothetical protein 0.01 OrthoFinder
Vocar.0009s0068.1 32893144 Ribosomal protein L18e/L15P [Interproscan]. 0.02 OrthoFinder
XM_002501489.1 MICPUN_94088, 94088 Ribosomal protein L18e/L15P [Interproscan]. 0.07 OrthoFinder
XM_003057924.1 MicpuC2_26131, 26131 Ribosomal protein L18e/L15P [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000561.1_cds_GFH12979.1_7456 HaLaN_08771, GFH12979 60S ribosomal protein L27a 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60230.1_4356 PRW60230 60S ribosomal L27a-3 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 28 144
No external refs found!