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  5. SymbC1.scaffold3544.4

SymbC1.scaffold3544.4 (3544.4)


Aliases : 3544.4

Description : Ancestral coatomer element 1, Sec16/Sec31 [Interproscan].


Gene families : OG_01_0001224 (OrthoFinder) Phylogenetic Tree(s): OG0001224_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3544.4

Target Alias Description ECC score Gene Family Method Actions
EOD35768 No alias Secretory protein 31 [Ensembl]. 0.01 OrthoFinder
lcl|LHPG02000015.1_cds_PRW34057.1_2866 PRW34057 Transport SEC31-like protein B isoform A 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495788.1_1786 KAA8495788 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006077 (1->6)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006078 (1->6)-beta-D-glucan biosynthetic process IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR024298 ACE1_Sec16_Sec31 47 170
No external refs found!