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  5. SymbC1.scaffold351.8

SymbC1.scaffold351.8 (351.8)


Aliases : 351.8

Description : Thioredoxin domain [Interproscan].


Gene families : OG_01_0000032 (OrthoFinder) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold351.8
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cz04g33190.t1 No alias Hypothetical protein 0.02 OrthoFinder
Sro19_g013360.1 Contig446.g6000 Thioredoxin 0.01 OrthoFinder
Sro865_g212760.1 Contig3005.g23899 Thioredoxin 0.01 OrthoFinder
TP07G01450.1 No alias Thioredoxin domain [Interproscan]. 0.01 OrthoFinder
XM_002503780.1 MICPUN_59817, 59817 Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
XM_002506614.1 MICPUN_77096, 77096 Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000029.1_cds_PRW05787.1_6065 PRW05787 Thioredoxin F-chloroplastic-like 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498554.1_7507 KAA8498554 Thioredoxin-like 2, chloroplastic 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497422.1_1151 KAA8497422 Thioredoxin-1 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497423.1_1152 KAA8497423 Thioredoxin-2 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0004019 adenylosuccinate synthase activity IEP Enrichment
MF GO:0004478 methionine adenosyltransferase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
MF GO:0005544 calcium-dependent phospholipid binding IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0046500 S-adenosylmethionine metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 56 154
No external refs found!