SymbC1.scaffold3449.2 (3449.2)

Aliases : 3449.2

Description : RNA recognition motif domain [Interproscan].

Gene families : OG_01_0000048 (OrthoFinder) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold3449.2
Cluster	HCCA: Cluster_698

Target	Alias	Description	ECC score	Gene Family Method
PTI_05G02190.1	No alias	RNA recognition motif domain [Interproscan].	0.01	OrthoFinder
Vocar.0007s0376.1	32887918	Cleavage stimulation factor subunit 2, hinge domain; RNA...	0.02	OrthoFinder
XM_003057264.1	MicpuC2_62347, 62347	RNA recognition motif domain [Interproscan].	0.01	OrthoFinder
XM_003060549.1	MicpuC2_59958, 59958	RNA recognition motif domain [Interproscan].	0.01	OrthoFinder
lcl\|LHPG02000003.1_cds_PRW59679.1_6108	PRW59679	Cleavage stimulating factor 64-like	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	Enrichment
BP	GO:0015693	magnesium ion transport	IEP	Enrichment
BP	GO:0030001	metal ion transport	IEP	Enrichment
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	6	63

External Links

No external refs found!