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  5. Cpa|evm.model.tig00020563.190

Cpa|evm.model.tig00020563.190 (tig00020563_g11392.t1)


Aliases : tig00020563_g11392.t1

Description : Cullin-4 OS=Arabidopsis thaliana


Gene families : OG_01_0000229 (OrthoFinder) Phylogenetic Tree(s): OG0000229_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020563.190
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
Cre17.g734400 30781960, CUL3 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
Cz01g09050.t1 No alias Cullin protein, neddylation domain; Cullin, N-terminal... 0.02 OrthoFinder
Dusal.1455s00001.1 33200846 Cullin protein, neddylation domain [Interproscan]. 0.02 OrthoFinder
TP11G00740.1 No alias Cullin protein, neddylation domain; Cullin, N-terminal... 0.02 OrthoFinder
Transcript_contig_54536 54536 Cullin protein, neddylation domain; Cullin, N-terminal... 0.02 OrthoFinder
XM_003062494.1 MicpuC2_45869, 45869 Cullin protein, neddylation domain; Cullin, N-terminal... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
CC GO:0005929 cilium IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
CC GO:0031514 motile cilium IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
CC GO:0120025 plasma membrane bounded cell projection IEP Enrichment
InterPro domains Description Start Stop
IPR019559 Cullin_neddylation_domain 115 175
IPR001373 Cullin_N 2 84
No external refs found!