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  5. Cpa|evm.model.tig00020563.189

Cpa|evm.model.tig00020563.189 (tig00020563_g11391.t1)


Aliases : tig00020563_g11391.t1

No description available


Gene families : OG_01_0000156 (OrthoFinder) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020563.189
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Cre01.g052250 30789580 Redox homeostasis.chloroplast redox homeostasis.X-type... 0.02 OrthoFinder
OT_05G00960.1 No alias Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
PTI_01G02520.1 No alias Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_58563 58563 Thioredoxin domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_89560 89560 Thioredoxin domain [Interproscan]. 0.01 OrthoFinder
XM_002507536.1 MICPUN_55177, 55177 Thioredoxin domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0010242 oxygen evolving activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
CC GO:0030076 light-harvesting complex IEP Enrichment
CC GO:0030089 phycobilisome IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 53 153
No external refs found!