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  5. SymbC1.scaffold334.4

SymbC1.scaffold334.4 (334.4)


Aliases : 334.4

Description : Reverse transcriptase, RNA-dependent DNA polymerase; Dynein heavy chain, hydrolytic ATP-binding dynein motor region [Interproscan].


Gene families : OG_01_0000011 (OrthoFinder) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold334.4
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Dusal.0588s00008.1 33195778 Dynein heavy chain 3, AAA+ lid domain; Dynein heavy... 0.01 OrthoFinder
EOD15344 No alias Dynein heavy chain, AAA 5 extension domain; Dynein heavy... 0.02 OrthoFinder
EOD19332 No alias Dynein heavy chain AAA lid domain; Dynein heavy chain,... 0.02 OrthoFinder
SymbC1.scaffold451.4 451.4 Dynein heavy chain region D6 P-loop domain; Dynein heavy... 0.03 OrthoFinder
lcl|BLLF01000014.1_cds_GFH05927.1_404 HaLaN_00472, GFH05927 Dynein-1, subspecies f 0.01 OrthoFinder
lcl|BLLF01000711.1_cds_GFH14315.1_8792 HaLaN_10346, GFH14315 Dynein heavy chain, domain-1; Dynein heavy chain,... 0.01 OrthoFinder
lcl|BLLF01001249.1_cds_GFH18110.1_12587 HaLaN_14854, GFH18110 Flagellar inner arm dynein 1 heavy chain alpha 0.02 OrthoFinder
lcl|BLLF01002126.1_cds_GFH22800.1_17277 HaLaN_20316, GFH22800 Dynein heavy chain, domain-1 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002126.1_cds_GFH22801.1_17278 HaLaN_20317, GFH22801 Dynein heavy chain, domain-2 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01004088.1_cds_GFH28896.1_23373 HaLaN_27462, GFH28896 Dynein heavy chain, domain-1 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR035699 AAA_6 972 1168
IPR013103 RVT_2 208 455
No external refs found!