SymbC1.scaffold3282.3 (3282.3)

Aliases : 3282.3

Description : Calcineurin-like phosphoesterase domain, ApaH type; EF-hand domain; Choline transporter-like [Interproscan].

Gene families : OG_01_0001533 (OrthoFinder) Phylogenetic Tree(s): OG0001533_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold3282.3
Cluster	HCCA: Cluster_20

Target	Alias	Description	ECC score	Gene Family Method	Actions
Dusal.0003s00058.1	33187542	Choline transporter-like [Interproscan].	0.03	OrthoFinder
Sro17_g012300.1	Contig269.g3409	Choline transporter-like protein	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
MF	GO:0016787	hydrolase activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0010181	FMN binding	IEP	Enrichment
BP	GO:0016192	vesicle-mediated transport	IEP	Enrichment
MF	GO:0020037	heme binding	IEP	Enrichment
CC	GO:0030117	membrane coat	IEP	Enrichment
MF	GO:0030246	carbohydrate binding	IEP	Enrichment
MF	GO:0030247	polysaccharide binding	IEP	Enrichment
MF	GO:0046906	tetrapyrrole binding	IEP	Enrichment
MF	GO:0051536	iron-sulfur cluster binding	IEP	Enrichment
MF	GO:0051540	metal cluster binding	IEP	Enrichment
MF	GO:2001070	starch binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR004843	Calcineurin-like_PHP_ApaH	1085	1239
IPR002048	EF_hand_dom	840	860
IPR007603	Choline_transptr-like	232	558

External Links

No external refs found!