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  5. SymbC1.scaffold3280.7

SymbC1.scaffold3280.7 (3280.7)


Aliases : 3280.7

Description : Leucine-rich repeat [Interproscan].


Gene families : OG_01_0000170 (OrthoFinder) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3280.7
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
EOD22357 No alias Leucine-rich repeat [Interproscan]. 0.01 OrthoFinder
EOD26951 No alias Leucine-rich repeat [Interproscan]. 0.01 OrthoFinder
EOD28723 No alias Leucine-rich repeat [Interproscan]. 0.01 OrthoFinder
EOD34394 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004055 argininosuccinate synthase activity IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 384 407
IPR001611 Leu-rich_rpt 528 551
IPR001611 Leu-rich_rpt 501 523
IPR001611 Leu-rich_rpt 418 438
IPR001611 Leu-rich_rpt 473 495
No external refs found!