1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold3279.6

SymbC1.scaffold3279.6 (3279.6)


Aliases : 3279.6

Description : SRCR domain; Tyrosine-protein kinase ephrin type A/B receptor-like; Galactose oxidase, central domain [Interproscan].


Gene families : OG_01_0005541 (OrthoFinder) Phylogenetic Tree(s): OG0005541_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3279.6
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold2110.3 2110.3 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold3279.7 3279.7 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005044 scavenger receptor activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR011641 Tyr-kin_ephrin_A/B_rcpt-like 1814 1856
IPR011641 Tyr-kin_ephrin_A/B_rcpt-like 1059 1096
IPR011641 Tyr-kin_ephrin_A/B_rcpt-like 1609 1647
IPR001190 SRCR 148 236
No external refs found!