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  5. SymbC1.scaffold3234.11

SymbC1.scaffold3234.11 (3234.11)


Aliases : 3234.11

Description : Hypothetical protein


Gene families : OG_01_0000009 (OrthoFinder) Phylogenetic Tree(s): OG0000009_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3234.11

Target Alias Description ECC score Gene Family Method Actions
Dusal.1150s00003.1 33196712 ShKT domain; Oxoglutarate/iron-dependent dioxygenase... 0.01 OrthoFinder
PTI_01G05130.1 No alias Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.02 OrthoFinder
Sro1062_g236900.1 Contig721.g8296 Prolyl 4-hydroxylase subunit alpha-1 0.02 OrthoFinder
SymbC1.scaffold3239.6 3239.6 ShKT domain; PAN/Apple domain [Interproscan]. 0.02 OrthoFinder
Vocar.0004s0479.1 32889423 Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.02 OrthoFinder
Vocar.0005s0336.1 32883946 Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.01 OrthoFinder
XM_002505181.1 MICPUN_70761, 70761 Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment

No InterPro domains available for this sequence

No external refs found!