SymbC1.scaffold3185.7 (3185.7)

Aliases : 3185.7

Description : Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella [Interproscan].

Gene families : OG_01_0000355 (OrthoFinder) Phylogenetic Tree(s): OG0000355_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold3185.7
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
Sro130_g061830.1	Contig2611.g21106	Hypothetical protein	0.02	OrthoFinder
Sro177_g077750.1	Contig795.g8901	Hypothetical protein	0.02	OrthoFinder
Sro2256_g321020.1	Contig1739.g15493	Hypothetical protein	0.01	OrthoFinder
Sro2418_g327020.1	Contig3744.g28704	Hypothetical protein	0.01	OrthoFinder
Sro2986_g341670.1	Contig224.g2649	Hypothetical protein	0.01	OrthoFinder
Sro451_g145720.1	Contig1599.g14516	Hypothetical protein	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	Enrichment
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Enrichment
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	Enrichment
MF	GO:0004198	calcium-dependent cysteine-type endopeptidase activity	IEP	Enrichment
MF	GO:0004618	phosphoglycerate kinase activity	IEP	Enrichment
BP	GO:0006508	proteolysis	IEP	Enrichment
MF	GO:0008233	peptidase activity	IEP	Enrichment
MF	GO:0008234	cysteine-type peptidase activity	IEP	Enrichment
CC	GO:0009522	photosystem I	IEP	Enrichment
CC	GO:0009538	photosystem I reaction center	IEP	Enrichment
MF	GO:0016151	nickel cation binding	IEP	Enrichment
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	Enrichment
MF	GO:2001070	starch binding	IEP	Enrichment

No InterPro domains available for this sequence

External Links

No external refs found!