SymbC1.scaffold3179.2 (3179.2)


Aliases : 3179.2

Description : Ribosomal protein L5, N-terminal; Ribosomal protein L5, C-terminal [Interproscan].


Gene families : OG_01_0003656 (OrthoFinder) Phylogenetic Tree(s): OG0003656_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3179.2
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
Cre01.g027000 30788418, RPL11 Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder
Cz06g11020.t1 No alias Ribosomal protein L5, C-terminal; Ribosomal protein L5,... 0.04 OrthoFinder
Dusal.0453s00002.1 33187614 Ribosomal protein L5, C-terminal; Ribosomal protein L5,... 0.05 OrthoFinder
EOD19037 No alias Ribosomal protein L5, C-terminal; Ribosomal protein L5,... 0.03 OrthoFinder
PTI_23G00120.1 No alias Ribosomal protein L5, C-terminal; Ribosomal protein L5,... 0.04 OrthoFinder
Sro673_g185180.1 Contig1386.g12783 60S ribosomal protein L11 (Fragment) 0.04 OrthoFinder
TP04G03730.1 No alias Ribosomal protein L5, C-terminal; Ribosomal protein L5,... 0.03 OrthoFinder
Vocar.0001s0942.1 32885998 Ribosomal protein L5, C-terminal; Ribosomal protein L5,... 0.07 OrthoFinder
XM_003054784.1 MicpuC2_24004, 24004 Ribosomal protein L5, C-terminal; Ribosomal protein L5,... 0.02 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44393.1_2191 PRW44393 60S ribosomal L11 0.07 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499115.1_8068 KAA8499115 60S ribosomal protein L11-2 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR031310 Ribosomal_L5_N 1 52
IPR031309 Ribosomal_L5_C 56 161
No external refs found!