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  5. SymbC1.scaffold3177.1

SymbC1.scaffold3177.1 (3177.1)


Aliases : 3177.1

Description : Chlorophyll A-B binding protein [Interproscan].


Gene families : OG_01_0000059 (OrthoFinder) Phylogenetic Tree(s): OG0000059_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold3177.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
EOD09088 No alias Light harvesting protein [Ensembl]. 0.01 OrthoFinder
PTI_02G00670.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
PTI_02G00680.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
PTI_03G05650.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
PTI_15G01940.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
PTI_15G03790.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
PTI_24G01720.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Sro851_g210830.1 Contig461.g6209 Chloroplastic 0.02 OrthoFinder
SymbC1.scaffold1704.1 1704.1 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold2188.2 2188.2 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016805 dipeptidase activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 1523 1719
IPR022796 Chloroa_b-bind 988 1143
IPR022796 Chloroa_b-bind 95 198
IPR022796 Chloroa_b-bind 228 383
IPR022796 Chloroa_b-bind 588 673
IPR022796 Chloroa_b-bind 1341 1498
IPR022796 Chloroa_b-bind 1201 1319
IPR022796 Chloroa_b-bind 408 559
IPR022796 Chloroa_b-bind 811 962
No external refs found!