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  5. SymbC1.scaffold3153.5

SymbC1.scaffold3153.5 (3153.5)


Aliases : 3153.5

Description : ABC-2 type transporter [Interproscan].


Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3153.5
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Sro16_g011820.1 Contig916.g9619 Putative white-brown complex homolog protein 30 0.02 OrthoFinder
SymbC1.scaffold131.10 131.10 ABC-2 type transporter [Interproscan]. 0.02 OrthoFinder
Vocar.0005s0197.1 32883888 ABC transporter-like [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 33 241
No external refs found!