SymbC1.scaffold3151.1 (3151.1)

Aliases : 3151.1

Description : Ubiquitin-like domain; Ubiquitin-associated domain; XPC-binding domain [Interproscan].

Gene families : OG_01_0001949 (OrthoFinder) Phylogenetic Tree(s): OG0001949_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: SymbC1.scaffold3151.1
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020848.21 tig00020848_g14548.t1 Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana 0.03 OrthoFinder
Sro219_g090420.1 Contig3313.g25982 Probable ubiquitin receptor 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006289 nucleotide-excision repair IEA Interproscan
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
InterPro domains Description Start Stop
IPR015940 UBA 93 127
IPR000626 Ubiquitin-like_dom 11 79
IPR015360 XPC-bd 193 246
No external refs found!