SymbC1.scaffold3101.2 (3101.2)

Aliases : 3101.2

Description : Sodium/calcium exchanger membrane region [Interproscan].

Gene families : OG_01_0000929 (OrthoFinder) Phylogenetic Tree(s): OG0000929_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: SymbC1.scaffold3101.2
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
EOD27220 No alias Na+/Ca2+-K+ exchanger [Ensembl]. 0.01 OrthoFinder
SymbC1.scaffold1808.6 1808.6 Sodium/calcium exchanger membrane region [Interproscan]. 0.03 OrthoFinder
XM_002508902.1 MICPUN_109307, 109307 Ca2+:Cation antiporter family 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003937 IMP cyclohydrolase activity IEP Enrichment
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
InterPro domains Description Start Stop
IPR004837 NaCa_Exmemb 78 216
IPR004837 NaCa_Exmemb 486 635
No external refs found!