1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold3099.3

SymbC1.scaffold3099.3 (3099.3)


Aliases : 3099.3

Description : Clp, N-terminal; Clp ATPase, C-terminal; ATPase, AAA-type, core; ClpA/ClpB, AAA lid domain; Soluble NSF attachment protein, SNAP [Interproscan].


Gene families : OG_01_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3099.3

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold35783.1 35783.1 ATPase, AAA-type, core; ClpA/ClpB, AAA lid domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_54694 54694 ClpA/ClpB, AAA lid domain; Clp ATPase, C-terminal;... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR041546 ClpA/ClpB_AAA_lid 484 556
IPR004176 Clp_R_dom 203 228
IPR004176 Clp_R_dom 118 157
IPR003959 ATPase_AAA_core 619 728
IPR003959 ATPase_AAA_core 345 458
IPR019489 Clp_ATPase_C 753 834
No external refs found!