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  5. SymbC1.scaffold3093.3

SymbC1.scaffold3093.3 (3093.3)


Aliases : 3093.3

Description : Hypothetical protein


Gene families : OG_01_0000978 (OrthoFinder) Phylogenetic Tree(s): OG0000978_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3093.3
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold13918.1 13918.1 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold1395.7 1395.7 Hypothetical protein 0.02 OrthoFinder
SymbC1.scaffold1543.1 1543.1 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold4158.6 4158.6 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold5540.1 5540.1 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold5928.1 5928.1 Hypothetical protein 0.01 OrthoFinder
SymbC1.scaffold6477.4 6477.4 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold675.8 675.8 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold8480.2 8480.2 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold8637.1 8637.1 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
BP GO:0000270 peptidoglycan metabolic process IEP Enrichment
MF GO:0003796 lysozyme activity IEP Enrichment
MF GO:0003842 1-pyrroline-5-carboxylate dehydrogenase activity IEP Enrichment
MF GO:0004325 ferrochelatase activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006026 aminoglycan catabolic process IEP Enrichment
BP GO:0006027 glycosaminoglycan catabolic process IEP Enrichment
BP GO:0006783 heme biosynthetic process IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Enrichment
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Enrichment
BP GO:0009253 peptidoglycan catabolic process IEP Enrichment
CC GO:0015627 type II protein secretion system complex IEP Enrichment
BP GO:0015628 protein secretion by the type II secretion system IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
BP GO:0016998 cell wall macromolecule catabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
BP GO:0030203 glycosaminoglycan metabolic process IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0044036 cell wall macromolecule metabolic process IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
MF GO:0061783 peptidoglycan muralytic activity IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
BP GO:0098776 protein transport across the cell outer membrane IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!