SymbC1.scaffold3072.6 (3072.6)


Aliases : 3072.6

Description : Protein kinase domain; EF-hand domain [Interproscan].


Gene families : OG_01_0000007 (OrthoFinder) Phylogenetic Tree(s): OG0000007_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3072.6
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000053.14 tig00000053_g23497.t1 Enzyme classification.EC_2 transferases.EC_2.7... 0.02 OrthoFinder
Cpa|evm.model.tig00000655.53 tig00000655_g2879.t1 Calcium-dependent protein kinase 27 OS=Oryza sativa... 0.01 OrthoFinder
Cre10.g457700 30790742 Enzyme classification.EC_2 transferases.EC_2.7... 0.01 OrthoFinder
Cz03g18230.t1 No alias Protein kinase domain [Interproscan]. 0.01 OrthoFinder
Dusal.0224s00021.1 33186484 EF-hand domain; Protein kinase domain [Interproscan]. 0.01 OrthoFinder
Dusal.0515s00011.1 33186737 Protein kinase domain [Interproscan]. 0.01 OrthoFinder
OT_01G01760.1 No alias Cyclic nucleotide-binding domain; Protein kinase domain;... 0.01 OrthoFinder
Sro1095_g240670.1 Contig3661.g28257 MAP kinase-activated protein kinase 2 (Fragment) 0.01 OrthoFinder
Sro127_g060960.1 Contig98.g1183 MAP kinase-activated protein kinase 2 (Fragment) 0.02 OrthoFinder
Sro155_g070490.1 Contig395.g5356 MAP kinase-activated protein kinase 2 (Fragment) 0.03 OrthoFinder
Sro1891_g303770.1 Contig3442.g26774 MAP kinase-activated protein kinase 2 (Fragment) 0.01 OrthoFinder
Sro2218_g319560.1 Contig3225.g25512 MAP kinase-activated protein kinase 2 (Fragment) 0.03 OrthoFinder
Sro31_g020410.1 Contig420.g5636 MAP kinase-activated protein kinase 2 (Fragment) 0.01 OrthoFinder
Sro976_g226980.1 Contig4239.g32121 MAP kinase-activated protein kinase 2 (Fragment) 0.01 OrthoFinder
SymbC1.scaffold1227.6 1227.6 Protein kinase domain; EF-hand domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold910.9 910.9 Protein kinase domain; EF-hand domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_54732 54732 Protein kinase domain; EF-hand domain [Interproscan]. 0.01 OrthoFinder
UNPLg00359.t1 No alias EF-hand domain; Protein kinase domain [Interproscan]. 0.02 OrthoFinder
XM_002506664.1 MICPUN_76120, 76120 Protein kinase domain [Interproscan]. 0.02 OrthoFinder
XM_003059527.1 MicpuC2_58959, 58959 Protein kinase domain; Cyclic nucleotide-binding domain... 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW60879.1_74 PRW60879 Calcium calmodulin-dependent kinase type 1 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496466.1_195 KAA8496466 Calcium-dependent protein kinase SK5 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494536.1_3066 KAA8494536 Myosin light chain kinase A 0.02 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493271.1_9572 KAA8493271 Myosin light chain kinase A 0.01 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8493066.1_2802 KAA8493066 Calcium-dependent protein kinase 10 0.01 OrthoFinder
lcl|VRMN01000013.1_cds_KAA8491493.1_6303 KAA8491493 Putative myosin light chain kinase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0004478 methionine adenosyltransferase activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Enrichment
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Enrichment
BP GO:0046500 S-adenosylmethionine metabolic process IEP Enrichment
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 27 203
IPR002048 EF_hand_dom 323 387
IPR002048 EF_hand_dom 251 312
No external refs found!