1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold3066.8

SymbC1.scaffold3066.8 (3066.8)


Aliases : 3066.8

Description : Ribosomal L28e/Mak16 [Interproscan].


Gene families : OG_01_0004517 (OrthoFinder) Phylogenetic Tree(s): OG0004517_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3066.8
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020710.93 tig00020710_g13357.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder
Cre11.g467578 30775702 Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 OrthoFinder
Cz16g20220.t1 No alias Ribosomal L28e/Mak16 [Interproscan]. 0.09 OrthoFinder
Dusal.0187s00004.1 33194139 Ribosomal L28e/Mak16 [Interproscan]. 0.05 OrthoFinder
EOD16362 No alias Ribosomal L28e/Mak16 [Interproscan]. 0.03 OrthoFinder
PTI_03G02910.1 No alias Ribosomal L28e/Mak16 [Interproscan]. 0.1 OrthoFinder
Sro827_g207890.1 Contig2896.g23094 60S ribosomal protein L28 0.09 OrthoFinder
TP01G10070.1 No alias Ribosomal L28e/Mak16 [Interproscan]. 0.12 OrthoFinder
Transcript_contig_79258 79258 Ribosomal L28e/Mak16 [Interproscan]. 0.02 OrthoFinder
Vocar.0014s0223.1 32888380 Ribosomal L28e/Mak16 [Interproscan]. 0.06 OrthoFinder
XM_002509130.1 MICPUN_52633, 52633 Ribosomal L28e/Mak16 [Interproscan]. 0.06 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491874.1_4882 KAA8491874 60S ribosomal protein L28 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006897 endocytosis IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0030991 intraciliary transport particle A IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR029004 L28e/Mak16 6 126
No external refs found!