1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold3035.1

SymbC1.scaffold3035.1 (3035.1)


Aliases : 3035.1

Description : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain; GAF domain [Interproscan].


Gene families : OG_01_0000012 (OrthoFinder) Phylogenetic Tree(s): OG0000012_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3035.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cre02.g143400 30785899 No description available 0.02 OrthoFinder
Dusal.0374s00002.1 33192013 Heme NO-binding; 3'5'-cyclic nucleotide... 0.01 OrthoFinder
SymbC1.scaffold2799.5 2799.5 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.04 OrthoFinder
SymbC1.scaffold490.12 490.12 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.03 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45060.1_2016 PRW45060 HD-domain PDEase isoform B 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006515 protein quality control for misfolded or incompletely synthesized proteins IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
BP GO:0031144 proteasome localization IEP Enrichment
BP GO:0031503 protein-containing complex localization IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0034629 cellular protein-containing complex localization IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0071630 nuclear protein quality control by the ubiquitin-proteasome system IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003018 GAF 67 200
IPR002073 PDEase_catalytic_dom 325 561
No external refs found!