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  5. SymbC1.scaffold3021.4

SymbC1.scaffold3021.4 (3021.4)


Aliases : 3021.4

Description : Ribosomal protein S2 [Interproscan].


Gene families : OG_01_0002089 (OrthoFinder) Phylogenetic Tree(s): OG0002089_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3021.4
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Cz04g36090.t1 No alias Ribosomal protein S2 [Interproscan]. 0.04 OrthoFinder
Dusal.0160s00027.1 33188334 Ribosomal protein S2 [Interproscan]. 0.03 OrthoFinder
OT_03G03280.1 No alias 40S ribosomal protein SA, C-terminal domain; Ribosomal... 0.02 OrthoFinder
PTI_12G01500.1 No alias Ribosomal protein S2 [Interproscan]. 0.05 OrthoFinder
Sro120_g058380.1 Contig2411.g19716 40S ribosomal protein SA 0.04 OrthoFinder
SymbC1.scaffold2216.1 2216.1 Ribosomal protein S2 [Interproscan]. 0.03 OrthoFinder
TP03G06220.1 No alias Ribosomal protein S2 [Interproscan]. 0.03 OrthoFinder
Transcript_contig_79177 79177 Ribosomal protein S2 [Interproscan]. 0.01 OrthoFinder
Vocar.0008s0458.1 32897164 Ribosomal protein S2 [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01000494.1_cds_GFH12355.1_6832 HaLaN_08023, GFH12355 40S ribosomal protein SA 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499119.1_8072 KAA8499119 40S ribosomal protein SA 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
CC GO:0030991 intraciliary transport particle A IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
InterPro domains Description Start Stop
IPR001865 Ribosomal_S2 1 79
IPR001865 Ribosomal_S2 81 133
No external refs found!