SymbC1.scaffold3015.3 (3015.3)

Aliases : 3015.3

Description : IBR domain; Zinc finger, C3HC4 RING-type [Interproscan].

Gene families : OG_01_0001542 (OrthoFinder) Phylogenetic Tree(s): OG0001542_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold3015.3
Cluster	HCCA: Cluster_17

Target	Alias	Description	ECC score	Gene Family Method	Actions
Vocar.0019s0261.1	32892807	IBR domain [Interproscan].	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	Enrichment
MF	GO:0003725	double-stranded RNA binding	IEP	Enrichment
BP	GO:0009451	RNA modification	IEP	Enrichment
MF	GO:0009982	pseudouridine synthase activity	IEP	Enrichment
MF	GO:0016866	intramolecular transferase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002867	IBR_dom	152	210
IPR018957	Znf_C3HC4_RING-type	76	122

External Links

No external refs found!