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  5. SymbC1.scaffold3008.6

SymbC1.scaffold3008.6 (3008.6)


Aliases : 3008.6

Description : DEAD/DEAH box helicase domain; Helicase, C-terminal [Interproscan].


Gene families : OG_01_0000110 (OrthoFinder) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3008.6
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001049.35 tig00001049_g6681.t1 DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa... 0.01 OrthoFinder
EOD10089 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.01 OrthoFinder
PTI_01G10140.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.01 OrthoFinder
XM_002506543.1 MICPUN_98380, 98380 Dead-box ATP-dependent RNA helicase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Enrichment
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 199 370
IPR001650 Helicase_C 412 516
No external refs found!