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  5. SymbC1.scaffold3006.11

SymbC1.scaffold3006.11 (3006.11)


Aliases : 3006.11

Description : Chaperonin Cpn60/TCP-1 family [Interproscan].


Gene families : OG_01_0000322 (OrthoFinder) Phylogenetic Tree(s): OG0000322_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3006.11
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cre06.g309100 30779697, CPN60C External stimuli response.temperature.Hsp... 0.01 OrthoFinder
Dusal.0053s00010.1 33186582 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
Dusal.0817s00005.1 33195411 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
Sro397_g134540.1 Contig157.g1792 60 kDa chaperonin (Fragment) 0.02 OrthoFinder
TPCG02240.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
Transcript_contig_54720 54720 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004451 isocitrate lyase activity IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 7 188
No external refs found!