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  5. SymbC1.scaffold29544.1

SymbC1.scaffold29544.1 (29544.1)


Aliases : 29544.1

Description : Isopropylmalate dehydrogenase-like domain; Non-haem dioxygenase N-terminal domain [Interproscan].


Gene families : OG_01_0000184 (OrthoFinder) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold29544.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold25.45 25.45 ABC transporter substrate-binding protein PnrA-like;... 0.06 OrthoFinder
Transcript_contig_80088 80088 Non-haem dioxygenase N-terminal domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR024084 IsoPropMal-DH-like_dom 6 350
IPR026992 DIOX_N 374 436
No external refs found!